TRDB--The Tandem Repeats Database
نویسندگان
چکیده
منابع مشابه
TRDB—The Tandem Repeats Database
Tandem repeats in DNA have been under intensive study for many years, first, as a consequence of their usefulness as genomic markers and DNA fingerprints and more recently as their role in human disease and regulatory processes has become apparent. The Tandem Repeats Database (TRDB) is a public repository of information on tandem repeats in genomic DNA. It contains a variety of tools for repeat...
متن کاملTRedD—A database for tandem repeats over the edit distance
A 'tandem repeat' in DNA is a sequence of two or more contiguous, approximate copies of a pattern of nucleotides. Tandem repeats are common in the genomes of both eukaryotic and prokaryotic organisms. They are significant markers for human identity testing, disease diagnosis, sequence homology and population studies. In this article, we describe a new database, TRedD, which contains the tandem ...
متن کاملTandem Repeats in Prokaryotic Genomes
1 Department of Information Science, Graduate School of Science, Hirosaki University, 3 Bunkyo-cho, Hirosaki 036-8561, Japan 2 Department of Electronic and Information System Engineering, Faculty of Science and Technology, Hirosaki University, 3 Bunkyo-cho, Hirosaki 036-8561, Japan 3 Graduate School of Mathematics, Nagoya University, Chikusa-ku, Nagoya 464-8602, Japan 4 Protonic NanoMachine Pro...
متن کاملTandem repeats: two different approaches
where the pattern composed by the three bases CGG in the left sequence is transformed in five identical and adjacent copies. Additional mutational laws can cause mismatch between the bases of the pattern and the bases of the repeated copies, for this reason sometimes there is no an exact repetition of the pattern but there is an approximate repetition in which every copies of the pattern is qui...
متن کاملTRbase: a database relating tandem repeats to disease genes for the human genome
MOTIVATION Tandem repeats are associated with disease genes, play an important role in evolution and are important in genomic organization and function. Although much research has been done on short perfect patterns of repeats, there has been less focus on imperfect repeats. Thus, there is an acute need for a tandem repeats database that provides reliable and up to date information on both perf...
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ژورنال
عنوان ژورنال: Nucleic Acids Research
سال: 2007
ISSN: 0305-1048,1362-4962
DOI: 10.1093/nar/gkl1013